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1

Automated docking of flexible ligands: Applications of autodock

David S. Goodsell, Garrett M. Morris, Arthur J. Olson

Journal:

Journal of Molecular Recognition

Year:

1996

Language:

english

File:

PDF, 536 KB

english, 1996

2

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

Garrett M. Morris, Ruth Huey, William Lindstrom, Michel F. Sanner, Richard K. Belew, David S. Goodsell, Arthur J. Olson

Journal:

Journal of Computational Chemistry

Year:

2009

Language:

english

File:

PDF, 384 KB

english, 2009

3

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

Morris, Garrett M., Goodsell, David S., Halliday, Robert S., Huey, Ruth, Hart, William E., Belew, Richard K., Olson, Arthur J.

Journal:

Journal of Computational Chemistry

Year:

1998

Language:

english

File:

PDF, 467 KB

english, 1998

4

Automated docking to multiple target structures: Incorporation of protein mobility and structural water heterogeneity in AutoDock

Fredrik Österberg, Garrett M. Morris, Michel F. Sanner, Arthur J. Olson, David S. Goodsell

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 454 KB

english, 2002

5

The majority of transcripts in the squid nervous system are extensively recoded by A-to-I RNA editing

Alon, Shahar, Garrett, Sandra C, Levanon, Erez Y, Olson, Sara, Graveley, Brenton R, Rosenthal, Joshua J C, Eisenberg, Eli

Journal:

Year:

2015

Language:

english

File:

PDF, 1.51 MB

english, 2015

6

Impact of integrated translational research on clinical exome sequencing

Klee, Eric W., Cousin, Margot A., Pinto e Vairo, Filippo, Morales-Rosado, Joel A., Macke, Erica L., Jenkinson, W. Garrett, Ferrer, Alejandro, Schultz-Rogers, Laura E., Olson, Rory J., Oliver, Gavin R.

Journal:

Genetics in Medicine

Year:

2020

File:

PDF, 824 KB

2020

7

The Arthroscopic Surgical Skill Evaluation Tool (ASSET)

Koehler, R. J., Amsdell, S., Arendt, E. A., Bisson, L. J., Bramen, J. P., Butler, A., Cosgarea, A. J., Harner, C. D., Garrett, W. E., Olson, T., Warme, W. J., Nicandri, G. T.

Journal:

American Journal of Sports Medicine

Year:

2013

Language:

english

File:

PDF, 458 KB

english, 2013

8

Buildup and relaxation of stress in chemically strengthened glass

Varshneya, Arun K., Olson, Garrett A., Kreski, Patrick K., Gupta, Prabhat K.

Journal:

Journal of Non-Crystalline Solids

Year:

2015

Language:

english

File:

PDF, 1.09 MB

english, 2015

9

[American Institute of Aeronautics and Astronautics Intersociety Energy Conversion Engineering Conference - Monterey,CA,U.S.A. (07 August 1994 - 12 August 1994)] Intersociety Energy Conversion Engineering Conference - Air Force Titan IV Centaur launch vehicle 250 ampere-hour lithium-thionyl chloride battery development, qualification and flight status

McDermott, Joseph, Olson, Garrett, Svaleson, Michael

Language:

english

File:

PDF, 625 KB

english

10

A New Interpretation of Na + Ion Conduction in and the Structures and Properties of Sodium BoroSilicate Mixed Glass Former Glasses

Martin, Steve W, Christensen, Randilynn, Olson, Garrett, Kieffer, John, Wang, Weimin

Journal:

The Journal of Physical Chemistry C

Year:

2019

Language:

english

File:

PDF, 755 KB

english, 2019

11

Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease

Mi Li, Garrett M. Morris, Taekyu Lee, Gary S. Laco, Chi-Huey Wong, Arthur J. Olson, John H. Elder, Alexander Wlodawer, Alla Gustchina

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2000

Language:

english

File:

PDF, 713 KB

english, 2000

12

A semiempirical free energy force field with charge-based desolvation

Ruth Huey, Garrett M. Morris, Arthur J. Olson, David S. Goodsell

Journal:

Journal of Computational Chemistry

Year:

2007

Language:

english

File:

PDF, 263 KB

english, 2007

13

Selection, evaluation, and control of the assay of the pharmaceutical product II. Effect of sampling and bulk mix heterogeneity on tablet variation

Edward R. Garrett, Edward C. Olson

Journal:

Journal of Pharmaceutical Sciences

Year:

1962

Language:

english

File:

PDF, 243 KB

english, 1962

14

Design and synthesis of broad-Based mono- and bi- cyclic inhibitors of FIV and HIV proteases

Chi Ching Mak, Ashraf Brik, Danica L Lerner, John H Elder, Garrett M Morris, Arthur J Olson, Chi-Huey Wong

Journal:

Bioorganic & Medicinal Chemistry

Year:

2003

Language:

english

File:

PDF, 399 KB

english, 2003

15

Evolutionary analysis of HIV-1 protease inhibitors: Methods for design of inhibitors that evade resistance

Daniel Stoffler, Michel F. Sanner, Garrett M. Morris, Arthur J. Olson, David S. Goodsell

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 2.28 MB

english, 2002

16

Model of the αLβ2 integrin I-domain/ICAM-1 DI interface suggests that subtle changes in loop orientation determine ligand specificity

Glen B. Legge, Garrett M. Morris, Michel F. Sanner, Yoshikazu Takada, Arthur J. Olson, Flavio Grynszpan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 2.04 MB

english, 2002

17

Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4

Garrett M. Morris, David S. Goodsell, Ruth Huey, Arthur J. Olson

Journal:

Journal of Computer-Aided Molecular Design

Year:

1996

Language:

english

File:

PDF, 1.13 MB

english, 1996

18

Seeing our way to drug design

Arthur J. Olson, Garrett M. Morris

Journal:

Perspectives in Drug Discovery and Design

Year:

1993

Language:

english

File:

PDF, 4.56 MB

english, 1993

19

Active site binding modes of curcumin in HIV-1 protease and integrase

Opa Vajragupta, Preecha Boonchoong, Garrett M. Morris, Arthur J. Olson

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2005

Language:

english

File:

PDF, 645 KB

english, 2005

20

Impaired myelopoiesis in mice lacking the repressors of translation initiation, 4E-BP1 and 4E-BP2

Katie E. Olson, Garrett C. Booth, Francis Poulin, Nahum Sonenberg, Laura Beretta

Journal:

Year:

2009

Language:

english

File:

PDF, 492 KB

english, 2009

21

Structural mapping of CD134 residues critical for interaction with feline immunodeficiency virus

de Parseval, Aymeric, Chatterji, Udayan, Morris, Garrett, Sun, Peiqing, Olson, Arthur J, Elder, John H

Journal:

Nature Structural and Molecular Biology

Year:

2004

Language:

english

File:

PDF, 824 KB

english, 2004

22

Automated docking of ligands to an artificial active site: augmenting crystallographic analysis with computer modeling

Robin J. Rosenfeld, David S. Goodsell, Rabi A. Musah, Garrett M. Morris, David B. Goodin, Arthur J. Olson

Journal:

Journal of Computer-Aided Molecular Design

Year:

2003

Language:

english

File:

PDF, 224 KB

english, 2003

23

Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency†

Rosenfeld, Robin J., Garcin, Elsa D., Panda, Koustubh, Andersson, Gunilla, Åberg, Anders, Wallace, Alan V., Morris, Garrett M., Olson, Arthur J., Stuehr, Dennis J., Tainer, John A.

Journal:

Year:

2002

Language:

english

File:

PDF, 745 KB

english, 2002

24

Coevolution and subsite decomposition for the design of resistance-evading HIV-1 protease inhibitors

Christopher D Rosin, Richard K Belew, Wynn L Walker, Garrett M Morris, Arthur J Olson, David S Goodsell

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 350 KB

english, 1999

25

Recognition templates for predicting adenylate-binding sites in proteins

Shanrong Zhao, Garrett M. Morris, Arthur J. Olson, David S. Goodsell

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 384 KB

english, 2001

26

A Dynamic Model of HIV Integrase Inhibition and Drug Resistance

Alex L. Perryman, Stefano Forli, Garrett M. Morris, Catherine Burt, Yuhui Cheng, Michael J. Palmer, Kevin Whitby, J. Andrew McCammon, Chris Phillips, Arthur J. Olson

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 1.97 MB

english, 2010

27

The glass transition temperature of mixed glass former 0.35Na2O + 0.65[xB2O3 + (1 − x)P2O5] glasses

Randilynn Christensen, Jennifer Byer, Garrett Olson, Steve W. Martin

Journal:

Journal of Non-Crystalline Solids

Year:

2012

Language:

english

File:

PDF, 1.24 MB

english, 2012

28

The densities of mixed glass former 0.35 Na2O + 0.65 [xB2O3 + (1 − x)P2O5] glasses related to the atomic fractions and volumes of short range structures

Randilynn Christensen, Jennifer Byer, Garrett Olson, Steve W. Martin

Journal:

Journal of Non-Crystalline Solids

Year:

2012

Language:

english

File:

PDF, 962 KB

english, 2012

29

281 Phase I study of intravenous (IV) CI-1033 in patients with advanced solid tumors

G. Simon, S. Olson, M. Langevin, I. Eiseman, J. Mahany, W. Helmke, C. Garrett, R. Lush, P. Lenehan, D. Sullivan

Journal:

European Journal of Cancer Supplements

Year:

2004

Language:

english

File:

PDF, 144 KB

english, 2004

30

Immunochromatography and cardiotoxicity of sea nettle (Chrysaora quinquecirrha) polyps and cysts

C.Erik Olson, David Garrett Cargo, Gary Jim Calton, Joseph Warren Burnett

Journal:

Year:

1985

Language:

english

File:

PDF, 369 KB

english, 1985

31

Automated Docking with Protein Flexibility in the Design of Femtomolar “Click Chemistry” Inhibitors of Acetylcholinesterase

Morris, Garrett M., Green, Luke G., Radić, Zoran, Taylor, Palmer, Sharpless, K. Barry, Olson, Arthur J., Grynszpan, Flavio

Journal:

Journal of Chemical Information and Modeling

Year:

2013

Language:

english

File:

PDF, 1.35 MB

english, 2013

32

Recombinant Probes for Visualizing Endogenous Synaptic Proteins in Living Neurons

Gross, Garrett G., Junge, Jason A., Mora, Rudy J., Kwon, Hyung-Bae, Olson, C. Anders, Takahashi, Terry T., Liman, Emily R., Ellis-Davies, Graham C.R., McGee, Aaron W., Sabatini, Bernardo L., Roberts,

Journal:

Year:

2013

Language:

english

File:

PDF, 3.78 MB

english, 2013

33

Functional Proteomic and Structural Insights into Molecular Recognition in the Nitrilase Family Enzymes †‡

Barglow, Katherine T., Saikatendu, Kumar S., Bracey, Michael H., Huey, Ruth, Morris, Garrett M., Olson, Arthur J., Stevens, Raymond C., Cravatt, Benjamin F.

Journal:

Year:

2008

Language:

english

File:

PDF, 11.89 MB

english, 2008

34

On the Synthesis and Adsorption Properties of Single-Unit-Cell Hierarchical Zeolites Made by Rotational Intergrowths

Xu, Dandan, Swindlehurst, Garrett R., Wu, Haohan, Olson, David H., Zhang, Xueyi, Tsapatsis, Michael

Journal:

Advanced Functional Materials

Year:

2014

Language:

english

File:

PDF, 3.89 MB

english, 2014

35

[Part 1: Biological Sciences] || Consistent Association between Sigma Elements and tRNA Genes in Yeast

Garrett M. Brodeur, Suzanne B. Sandmeyer and Maynard V. Olson

Journal:

Proceedings of the National Academy of Sciences

Year:

1983

Language:

english

File:

PDF, 1.79 MB

english, 1983

36

Random-Clone Strategy for Genomic Restriction Mapping in Yeast

Maynard V. Olson, James E. Dutchik, Madge Y. Graham, Garrett M. Brodeur, Cynthia Helms, Mark Frank, Mia MacCollin, Robert Scheinman and Thomas Frank

Journal:

Proceedings of the National Academy of Sciences

Year:

1986

Language:

english

File:

PDF, 1.02 MB

english, 1986

37

Coevolutionary Analysis of Resistance-Evading Peptidomimetic Inhibitors of HIV-1 Protease

Christopher D. Rosin, Richard K. Belew, Garrett M. Morris, Arthur J. Olson and David S. Goodsell

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.06 MB

english, 1999

38

Development of a New Type of Protease Inhibitors, Efficacious against FIV and HIV Variants

Lee, Taekyu, Le, Van-Duc, Lim, Dongyeol, Lin, Ying-Chuan, Morris, Garrett M., Wong, Andrew L., Olson, Arthur J., Elder, John H., Wong, Chi-Huey

Journal:

Journal of the American Chemical Society

Year:

1999

Language:

english

File:

PDF, 499 KB

english, 1999

39

Crystal Structures of the Inactive D30N Mutant of Feline Immunodeficiency Virus Protease Complexed with a Substrate and an Inhibitor †,‡

Laco, Gary S., Schalk-Hihi, Céline, Lubkowski, Jacek, Morris, Garrett, Zdanov, Alexander, Olson, Arthur, Elder, John H., Wlodawer, Alexander, Gustchina, Alla

Journal:

Year:

1997

Language:

english

File:

PDF, 333 KB

english, 1997

40

Ionic Conductivity of Mixed Glass Former 0.35Na 2 O + 0.65[ x B 2 O 3 + (1 – x )P 2 O 5 ] Glasses

Christensen, Randilynn, Olson, Garrett, Martin, Steve W.

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 1.10 MB

english, 2013

41

Structural Studies of Mixed Glass Former 0.35Na 2 O + 0.65[ x B 2 O 3 + (1 – x )P 2 O 5 ] Glasses by Raman and 11 B and 31 P Magic Angle Spinning Nuclear Magnetic Resonance Spectroscopies

Christensen, Randilynn, Olson, Garrett, Martin, Steve W.

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 899 KB

english, 2013

42

Mechanistic and structural requirements for active site labeling of phosphoglycerate mutase by spiroepoxides

Evans, Michael J., Morris, Garrett M., Wu, Jane, Olson, Arthur J., Sorensen, Erik J., Cravatt, Benjamin F.

Journal:

Molecular BioSystems

Year:

2007

Language:

english

File:

PDF, 677 KB

english, 2007

43

Zeolites: On the Synthesis and Adsorption Properties of Single-Unit-Cell Hierarchical Zeolites Made by Rotational Intergrowths (Adv. Funct. Mater. 2/2014)

Xu, Dandan, Swindlehurst, Garrett R., Wu, Haohan, Olson, David H., Zhang, Xueyi, Tsapatsis, Michael

Journal:

Advanced Functional Materials

Year:

2014

File:

PDF, 3.27 MB

2014

44

Increased Bioavailability of Intravenous Versus Oral CI-1033, a Pan erbB Tyrosine Kinase Inhibitor: Results of a Phase I Pharmacokinetic Study

Simon, G. R., Garrett, C. R., Olson, S. C., Langevin, M., Eiseman, I. A., Mahany, J. J., Williams, C. C., Lush, R., Daud, A., Munster, P., Chiappori, A., Fishman, M., Bepler, G., Lenehan, P. F., Sulli

Journal:

Clinical Cancer Research

Year:

2006

Language:

english

File:

PDF, 230 KB

english, 2006

45

Genome-wide identification of zero nucleotide recursive splicing in Drosophila

Duff, Michael O., Olson, Sara, Wei, Xintao, Garrett, Sandra C., Osman, Ahmad, Bolisetty, Mohan, Plocik, Alex, Celniker, Susan E., Graveley, Brenton R.

Journal:

Year:

2015

Language:

english

File:

PDF, 4.43 MB

english, 2015

46

Computational Coevolution of Antiviral Drug Resistance

Rosin, Christopher D., Belew, Richard K., Morris, Garrett M., Olson, Arthur J., Goodsell, David S.

Journal:

Artificial Life

Year:

1998

Language:

english

File:

PDF, 345 KB

english, 1998

47

Grid-Based Hydrogen Bond Potentials with Improved Directionality

Huey, Ruth, Goodsell, David, Morris, Garrett, Olson, Arthur

Journal:

Letters in Drug Design & Discovery

Year:

2004

Language:

english

File:

PDF, 147 KB

english, 2004

48

SPIE Proceedings [SPIE BiOS '99 International Biomedical Optics Symposium - San Jose, CA (Saturday 23 January 1999)] Lasers in Surgery: Advanced Characterization, Therapeutics, and Systems IX - Development of a cryosurgical technique for breast malignancies

Anderson, R. Rox, Rabin, Yoed, Julian, Thomas B., Bartels, Kenneth E., Bass, Lawrence S., Olson, Peter, Taylor, Michael J., Bornhop, Darryl J., Garrett, C. Gaelyn, Wolmark, Norman, Gregory, Kenton W.,

Year:

1999

Language:

english

File:

PDF, 259 KB

english, 1999

49

Evaluating the Effects of an Evidence-Based Hemostasis and Thrombosis Treatment Algorithm on Medical Practitioner and Trainee Clinical Decision-Making

Olson, Sven, Shatzel, Joseph, Tao, Derrick, Wasp, Garrett, DeLoughery, Thomas

Journal:

Seminars in Thrombosis and Hemostasis

Year:

2018

Language:

english

File:

PDF, 110 KB

english, 2018

50

Effectiveness of the International Phytosanitary Standard ISPM No. 15 on Reducing Wood Borer Infestation Rates in Wood Packaging Material Entering the United States

Haack, Robert A., Britton, Kerry O., Brockerhoff, Eckehard G., Cavey, Joseph F., Garrett, Lynn J., Kimberley, Mark, Lowenstein, Frank, Nuding, Amelia, Olson, Lars J., Turner, James, Vasilaky, Kathryn

Journal:

Year:

2014

Language:

english

File:

PDF, 702 KB

english, 2014

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